Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00183300 | CKAN_00725300 | A0A443N4W0 | A0A3S3MSA1 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Elongation factor 1-gamma 2. | 0.728 |
CKAN_00183300 | CKAN_01201900 | A0A443N4W0 | A0A3S3NNG0 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily. | 0.756 |
CKAN_00183300 | CKAN_01260900 | A0A443N4W0 | A0A3S3MPL7 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.616 |
CKAN_00183300 | CKAN_01630100 | A0A443N4W0 | A0A443P9A6 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.624 |
CKAN_00183300 | CKAN_02041600 | A0A443N4W0 | A0A443PKH5 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.621 |
CKAN_00183300 | CKAN_02293400 | A0A443N4W0 | A0A3S3PM22 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione synthetase. | 0.665 |
CKAN_00183300 | CKAN_02297200 | A0A443N4W0 | A0A3S3PM38 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.617 |
CKAN_00183300 | CKAN_02369000 | A0A443N4W0 | A0A3S3N228 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | 1-Cys peroxiredoxin. | 0.561 |
CKAN_00183300 | CKAN_02703400 | A0A443N4W0 | A0A443Q3K0 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.624 |
CKAN_00183300 | CKAN_02735300 | A0A443N4W0 | A0A3S4Q280 | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | 1-Cys peroxiredoxin. | 0.561 |
CKAN_00725300 | CKAN_00183300 | A0A3S3MSA1 | A0A443N4W0 | Elongation factor 1-gamma 2. | Putative glutathione S-transferase parC; Belongs to the GST superfamily. | 0.728 |
CKAN_00725300 | CKAN_01201900 | A0A3S3MSA1 | A0A3S3NNG0 | Elongation factor 1-gamma 2. | Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily. | 0.605 |
CKAN_00725300 | CKAN_01260900 | A0A3S3MSA1 | A0A3S3MPL7 | Elongation factor 1-gamma 2. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.459 |
CKAN_00725300 | CKAN_01630100 | A0A3S3MSA1 | A0A443P9A6 | Elongation factor 1-gamma 2. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.936 |
CKAN_00725300 | CKAN_02041600 | A0A3S3MSA1 | A0A443PKH5 | Elongation factor 1-gamma 2. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.441 |
CKAN_00725300 | CKAN_02293400 | A0A3S3MSA1 | A0A3S3PM22 | Elongation factor 1-gamma 2. | Glutathione synthetase. | 0.937 |
CKAN_00725300 | CKAN_02297200 | A0A3S3MSA1 | A0A3S3PM38 | Elongation factor 1-gamma 2. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.460 |
CKAN_00725300 | CKAN_02369000 | A0A3S3MSA1 | A0A3S3N228 | Elongation factor 1-gamma 2. | 1-Cys peroxiredoxin. | 0.935 |
CKAN_00725300 | CKAN_02703400 | A0A3S3MSA1 | A0A443Q3K0 | Elongation factor 1-gamma 2. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.936 |
CKAN_00725300 | CKAN_02735300 | A0A3S3MSA1 | A0A3S4Q280 | Elongation factor 1-gamma 2. | 1-Cys peroxiredoxin. | 0.935 |
page 1 of 6