Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00187000 | CKAN_00322600 | A0A443N4Y6 | A0A3S3NTD1 | GDSL esterase/lipase-like protein. | Mitochondrial import receptor subunit TOM40-1-like protein. | 0.499 |
CKAN_00187000 | CKAN_00353200 | A0A443N4Y6 | A0A3S3PX40 | GDSL esterase/lipase-like protein. | 60S ribosomal protein L21-1. | 0.437 |
CKAN_00187000 | CKAN_00662700 | A0A443N4Y6 | A0A443NHV8 | GDSL esterase/lipase-like protein. | Uncharacterized protein. | 0.432 |
CKAN_00187000 | CKAN_00809400 | A0A443N4Y6 | A0A443NLW6 | GDSL esterase/lipase-like protein. | 60S ribosomal protein L21-1. | 0.437 |
CKAN_00187000 | CKAN_01147600 | A0A443N4Y6 | A0A3S4NX35 | GDSL esterase/lipase-like protein. | Uncharacterized protein. | 0.432 |
CKAN_00187000 | CKAN_02531600 | A0A443N4Y6 | A0A443PYV0 | GDSL esterase/lipase-like protein. | 60S ribosomal protein L21-1. | 0.437 |
CKAN_00187000 | CKAN_02737400 | A0A443N4Y6 | A0A3S3N9C7 | GDSL esterase/lipase-like protein. | Cytochrome b559 subunit alpha. | 0.470 |
CKAN_00187000 | CKAN_02738200 | A0A443N4Y6 | A0A3S3PBZ6 | GDSL esterase/lipase-like protein. | Putative Photosystem II D2 protein. | 0.468 |
CKAN_00187000 | CKAN_02750400 | A0A443N4Y6 | A0A443Q4W9 | GDSL esterase/lipase-like protein. | Photosystem II protein I chloroplast. | 0.456 |
CKAN_00187000 | psbD | A0A443N4Y6 | A0A0U2F348 | GDSL esterase/lipase-like protein. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.468 |
CKAN_00322600 | CKAN_00187000 | A0A3S3NTD1 | A0A443N4Y6 | Mitochondrial import receptor subunit TOM40-1-like protein. | GDSL esterase/lipase-like protein. | 0.499 |
CKAN_00353200 | CKAN_00187000 | A0A3S3PX40 | A0A443N4Y6 | 60S ribosomal protein L21-1. | GDSL esterase/lipase-like protein. | 0.437 |
CKAN_00662700 | CKAN_00187000 | A0A443NHV8 | A0A443N4Y6 | Uncharacterized protein. | GDSL esterase/lipase-like protein. | 0.432 |
CKAN_00809400 | CKAN_00187000 | A0A443NLW6 | A0A443N4Y6 | 60S ribosomal protein L21-1. | GDSL esterase/lipase-like protein. | 0.437 |
CKAN_01147600 | CKAN_00187000 | A0A3S4NX35 | A0A443N4Y6 | Uncharacterized protein. | GDSL esterase/lipase-like protein. | 0.432 |
CKAN_02531600 | CKAN_00187000 | A0A443PYV0 | A0A443N4Y6 | 60S ribosomal protein L21-1. | GDSL esterase/lipase-like protein. | 0.437 |
CKAN_02737400 | CKAN_00187000 | A0A3S3N9C7 | A0A443N4Y6 | Cytochrome b559 subunit alpha. | GDSL esterase/lipase-like protein. | 0.470 |
CKAN_02737400 | CKAN_02738200 | A0A3S3N9C7 | A0A3S3PBZ6 | Cytochrome b559 subunit alpha. | Putative Photosystem II D2 protein. | 0.979 |
CKAN_02737400 | CKAN_02750400 | A0A3S3N9C7 | A0A443Q4W9 | Cytochrome b559 subunit alpha. | Photosystem II protein I chloroplast. | 0.996 |
CKAN_02737400 | psbD | A0A3S3N9C7 | A0A0U2F348 | Cytochrome b559 subunit alpha. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.979 |
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