STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00189200Translation elongation factor EF1A/initiation factor IF2gamma family protein isoform 1. (518 aa)    
Predicted Functional Partners:
CKAN_01934800
Eukaryotic peptide chain release factor subunit 1-3.
   
 0.981
CKAN_02196600
Eukaryotic peptide chain release factor subunit 1-3.
   
 0.981
CKAN_01354300
Protein SUPPRESSOR OF GENE SILENCING 3-like protein.
   
 0.981
CKAN_02193400
Protein SUPPRESSOR OF GENE SILENCING 3.
   
 0.981
CKAN_00275100
ABC transporter E family member 2.
   
 
 0.909
CKAN_01229700
ABC transporter E family member 2.
   
 
 0.909
CKAN_00964800
Regulator of nonsense transcripts 1.
    
 0.885
CKAN_01630000
Regulator of nonsense transcripts 1.
    
 0.885
CKAN_01068100
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.819
CKAN_01450500
Ribosomal protein S12/S23.
   
 0.819
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.