STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00200100Serine/threonine-protein phosphatase. (313 aa)    
Predicted Functional Partners:
CKAN_02401200
PP2A regulatory subunit TAP46.
    
 0.976
CKAN_01469500
30-cleavage and polyadenylation specificity factor 30.
    
 0.960
CKAN_01939200
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.
    
 0.939
CKAN_01562300
Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling.
    
 0.929
CKAN_00154300
Serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X2.
    
 0.906
CKAN_00740700
Anaphase-promoting complex subunit 1.
    
 0.901
CKAN_00576800
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.899
CKAN_00248000
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.899
CKAN_02332000
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.899
CKAN_00075500
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.899
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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