STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00207600Glycosyl hydrolases 36. (776 aa)    
Predicted Functional Partners:
CKAN_01774700
Galactose mutarotase-like domain-containing protein.
     
 0.855
CKAN_00714100
Nitrate reductase NADH-like protein.
  
 
 0.846
CKAN_01923800
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.846
CKAN_02206300
Nitrate reductase 2.
  
 
 0.846
CKAN_02206400
Nitrate reductase NADH-like protein.
  
 
 0.846
CKAN_01232000
Beta-fructofuranosidase, insoluble isoenzyme 1-like protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.827
CKAN_02653900
Beta-fructofuranosidase, insoluble isoenzyme 3-like protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.827
CKAN_00486900
Glycosyl hydrolases 36.
  
  
 
0.791
CKAN_02361200
Stachyose synthase.
  
  
 
0.791
CKAN_00405000
Putative galactinol--sucrose galactosyltransferase 6 isoform X1.
  
 
 
0.743
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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