STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00216400Tudor domain-containing protein. (1690 aa)    
Predicted Functional Partners:
CKAN_01208100
Methyl-CpG-binding domain-containing protein 9.
  
   
 0.583
CKAN_01634300
PHD-type domain-containing protein.
  
    0.487
CKAN_01563600
PHD-type domain-containing protein.
  
    0.486
CKAN_00925900
PHD-type domain-containing protein.
  
    0.481
CKAN_02216700
EPS15 EH.
  
     0.467
CKAN_02464600
Homeobox protein LUMINIDEPENDENS-like protein.
  
     0.459
CKAN_00627100
RNA recognition motif domain-containing protein.
  
     0.457
CKAN_00706500
EPS15 EH.
  
     0.454
CKAN_00499700
Zinc finger protein.
  
     0.450
CKAN_00834200
Arginine/serine-rich coiled-coil protein 2 isoform X1.
  
     0.443
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.