STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00269200B3 domain-containing protein. (676 aa)    
Predicted Functional Partners:
CKAN_00949400
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.708
CKAN_02520700
E3 ubiquitin-protein ligase AIP2.
    
 
 0.603
CKAN_00874700
Signal transduction response regulator.
    
 
 0.549
CKAN_01228500
Protein ABSCISIC ACID-INSENSITIVE 5.
    
 
 0.546
CKAN_02654700
Protein ABSCISIC ACID-INSENSITIVE 5.
    
 
 0.546
CKAN_00745000
Ethylene-responsive transcription factor ABI4-like protein.
   
 
 0.516
CKAN_00744400
Ethylene-responsive transcription factor ABI4-like protein.
   
 
 0.516
CKAN_01827600
Transcription factor TGA2.3-like protein.
      
 0.506
CKAN_00260700
Protein NBR1.
      
 0.499
CKAN_02178400
ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1.
    
 
 0.479
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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