STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00270600Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (449 aa)    
Predicted Functional Partners:
CKAN_01928600
Phosphatidylserine decarboxylase proenzyme 2 isoform X2.
  
 
0.992
CKAN_00535500
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.949
CKAN_01392900
Cardiolipin synthase CMP-forming, mitochondrial; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.949
CKAN_02487300
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.949
CKAN_02016600
Choline/ethanolaminephosphotransferase 1 isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.938
CKAN_01450000
CDP-diacylglycerol--serine O-phosphatidyltransferase 1.
     
 0.927
CKAN_02319900
CDP-diacylglycerol--serine O-phosphatidyltransferase 1 isoform X1.
     
 0.927
CKAN_00492800
Phospholipase D zeta 1.
   
 0.915
CKAN_02350200
Phospholipase.
   
 0.915
CKAN_00941500
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
    
 0.909
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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