STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00285200Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
CKAN_01913900
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.983
CKAN_01294100
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.983
CKAN_00041500
Uncharacterized protein.
   
 0.948
CKAN_02088800
DUF4378 domain-containing protein.
   
 0.948
CKAN_02088700
DUF3741 domain-containing protein.
   
 0.948
CKAN_02576800
Putative pre-16S rRNA nuclease isoform X3.
  
  
 0.850
CKAN_02630900
Thymidylate kinase isoform X1.
   
 
 0.828
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
   
 
 0.826
CKAN_01155600
Guanylate kinase 2-like protein.
   
 
 0.825
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
   
  
 0.825
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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