STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00314900Protein kinase domain-containing protein. (405 aa)    
Predicted Functional Partners:
CKAN_00504600
Serine/threonine-protein phosphatase.
    
 0.777
CKAN_02467900
Serine/threonine-protein phosphatase.
    
 0.777
CKAN_00802600
Cytochrome b245.
   
 0.753
CKAN_00884400
Respiratory burst oxidase protein A-like protein.
   
 0.753
CKAN_00498900
Respiratory burst oxidase protein B-like protein.
   
 0.673
CKAN_01581300
Cytochrome b245.
   
 0.673
CKAN_02463800
Respiratory burst oxidase protein B-like protein.
   
 0.673
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
 0.649
CKAN_01331100
Putative respiratory burst oxidase.
   
 0.582
CKAN_00046700
Dual specificity phosphatase Cdc25.
    
 0.529
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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