Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00339400 | CKAN_00384700 | A0A443N931 | A0A443NAB6 | Aluminum-activated malate transporter. | Transcription initiation factor TFIID subunit 5. | 0.724 |
CKAN_00339400 | CKAN_00553400 | A0A443N931 | A0A3S3MNU3 | Aluminum-activated malate transporter. | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | 0.724 |
CKAN_00339400 | CKAN_00556500 | A0A443N931 | A0A3S3MII4 | Aluminum-activated malate transporter. | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | 0.724 |
CKAN_00339400 | CKAN_01002400 | A0A443N931 | A0A3S3MRZ9 | Aluminum-activated malate transporter. | SAGA-associated factor 11. | 0.762 |
CKAN_00339400 | CKAN_01268500 | A0A443N931 | A0A443NZL1 | Aluminum-activated malate transporter. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.733 |
CKAN_00339400 | CKAN_02083600 | A0A443N931 | A0A3S3NPC9 | Aluminum-activated malate transporter. | TATA box-binding protein-associated factor RNA polymerase I subunit B. | 0.769 |
CKAN_00339400 | CKAN_02120600 | A0A443N931 | A0A3S3MXU9 | Aluminum-activated malate transporter. | Transcription initiation factor TFIID subunit 12b-like protein isoform X2. | 0.723 |
CKAN_00339400 | CKAN_02149800 | A0A443N931 | A0A443PNF0 | Aluminum-activated malate transporter. | Transformation/transcription domain-containing protein; Belongs to the PI3/PI4-kinase family. | 0.783 |
CKAN_00339400 | CKAN_02287500 | A0A443N931 | A0A3S4PQP0 | Aluminum-activated malate transporter. | TATA box binding protein associated factor TAF. | 0.728 |
CKAN_00339400 | CKAN_02537000 | A0A443N931 | A0A443PZ01 | Aluminum-activated malate transporter. | Transcriptional adapter. | 0.749 |
CKAN_00384700 | CKAN_00339400 | A0A443NAB6 | A0A443N931 | Transcription initiation factor TFIID subunit 5. | Aluminum-activated malate transporter. | 0.724 |
CKAN_00384700 | CKAN_00553400 | A0A443NAB6 | A0A3S3MNU3 | Transcription initiation factor TFIID subunit 5. | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | 0.985 |
CKAN_00384700 | CKAN_00556500 | A0A443NAB6 | A0A3S3MII4 | Transcription initiation factor TFIID subunit 5. | Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. | 0.985 |
CKAN_00384700 | CKAN_01002400 | A0A443NAB6 | A0A3S3MRZ9 | Transcription initiation factor TFIID subunit 5. | SAGA-associated factor 11. | 0.906 |
CKAN_00384700 | CKAN_01268500 | A0A443NAB6 | A0A443NZL1 | Transcription initiation factor TFIID subunit 5. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.465 |
CKAN_00384700 | CKAN_02083600 | A0A443NAB6 | A0A3S3NPC9 | Transcription initiation factor TFIID subunit 5. | TATA box-binding protein-associated factor RNA polymerase I subunit B. | 0.984 |
CKAN_00384700 | CKAN_02120600 | A0A443NAB6 | A0A3S3MXU9 | Transcription initiation factor TFIID subunit 5. | Transcription initiation factor TFIID subunit 12b-like protein isoform X2. | 0.987 |
CKAN_00384700 | CKAN_02149800 | A0A443NAB6 | A0A443PNF0 | Transcription initiation factor TFIID subunit 5. | Transformation/transcription domain-containing protein; Belongs to the PI3/PI4-kinase family. | 0.989 |
CKAN_00384700 | CKAN_02287500 | A0A443NAB6 | A0A3S4PQP0 | Transcription initiation factor TFIID subunit 5. | TATA box binding protein associated factor TAF. | 0.999 |
CKAN_00384700 | CKAN_02537000 | A0A443NAB6 | A0A443PZ01 | Transcription initiation factor TFIID subunit 5. | Transcriptional adapter. | 0.984 |
page 1 of 5