STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00336900Putative glutathione S-transferase parA. (219 aa)    
Predicted Functional Partners:
CKAN_00725300
Elongation factor 1-gamma 2.
   
 
 0.728
CKAN_00719600
Glutathione S-transferase; Belongs to the GST superfamily.
   
 
 0.505
CKAN_01935100
Glutathione S-transferase zeta class; Belongs to the GST superfamily.
   
 
 0.505
CKAN_02507800
4Fe-4S binding domain-containing protein.
    
  0.479
CKAN_02293400
Glutathione synthetase.
   
 0.477
CKAN_01479200
NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 9-like protein; Belongs to the complex I LYR family.
   
   0.437
CKAN_00931200
NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 8, mitochondrial isoform X3.
    
   0.405
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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