STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00361800alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (366 aa)    
Predicted Functional Partners:
CKAN_02555800
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.934
CKAN_01339500
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1.
    
 0.931
CKAN_01575600
Glycoside hydrolase.
   
 
 0.748
CKAN_01621000
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.748
CKAN_00434100
Sulfoquinovosidase-like protein.
   
 
 0.748
CKAN_01621100
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.748
CKAN_01933100
Putative glucan 1,3-alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.748
CKAN_01774700
Galactose mutarotase-like domain-containing protein.
     
 0.665
CKAN_00182300
Alpha-xylosidase 1; Belongs to the glycosyl hydrolase 31 family.
     
 0.661
CKAN_01890500
Nuclear pore complex protein NUP62.
     
 0.661
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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