STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00382900Putative GMP synthase glutamine-hydrolyzing. (377 aa)    
Predicted Functional Partners:
CKAN_02264000
Methyladenine glycosylase.
  
  
 
0.848
CKAN_01212400
DNA-3-methyladenine glycosylase isoform X1.
  
  
 
0.816
CKAN_01067200
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
  0.713
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
    
  0.665
CKAN_01155600
Guanylate kinase 2-like protein.
    
  0.665
CKAN_00915300
GMP synthase glutamine-hydrolyzing.
 
      0.476
CKAN_01016200
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.459
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
  0.447
CKAN_01285900
Outer envelope protein 64, mitochondrial.
    
 0.404
CKAN_01202100
Translocon at the outer membrane of chloroplasts 64.
    
 0.404
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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