STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00386200Acidic mammalian chitinase-like protein; Belongs to the glycosyl hydrolase 18 family. (390 aa)    
Predicted Functional Partners:
CKAN_02611100
Beta-hexosaminidase.
    
 0.881
CKAN_00592200
Putative cytochrome c oxidase subunit 5b-like protein.
   
 0.793
CKAN_01181400
Putative cytochrome c oxidase subunit 5b-like protein.
   
 0.793
CKAN_00202500
Beta-hexosaminidase.
    
 0.760
CKAN_00619200
Glycoside hydrolase family 20.
    
 0.760
CKAN_00618700
Beta-hexosaminidase.
    
 0.760
CKAN_00229700
Cytochrome c oxidase subunit 6a, mitochondrial-like protein isoform X2; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.753
CKAN_01936400
Cytochrome c oxidase subunit 6a, mitochondrial-like protein isoform X4; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.753
CKAN_00601900
Cytochrome c oxidase.
   
 0.726
CKAN_01902100
Cytochrome c oxidase subunit 6b-1-like protein.
   
 0.726
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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