STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00411200Transcription factor-like protein DPB; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (352 aa)    
Predicted Functional Partners:
CKAN_00277000
Retinoblastoma-related-like protein.
   
 0.972
CKAN_01409100
Transcription factor E2FA-like protein.
  
 0.956
CKAN_02651700
Transcription factor E2FA-like protein.
  
 0.950
CKAN_01481700
Transcription factor E2FB-like protein isoform X2.
  
 0.948
CKAN_01239600
Transcription factor E2FA-like protein.
  
 
 
 0.876
CKAN_00838400
SANT/Myb domain-containing protein.
   
 0.837
CKAN_02076900
Putative RNA polymerase II transcription factor B subunit 1-1 isoform X1.
    
   0.757
CKAN_00120200
Putative E3 ubiquitin-protein ligase RING1a isoform X2.
    
 0.682
CKAN_00193400
WD-40 repeat-containing protein MSI4-like protein.
   
 0.670
CKAN_00080900
WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family.
   
 0.670
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.