STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CKAN_00489400Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (996 aa)    
Predicted Functional Partners:
CKAN_01127700
Hydroxyproline O-arabinosyltransferase 1-like protein.
     
 0.761
CKAN_02441400
Peroxisome biogenesis protein 5.
   
 0.757
CKAN_00354100
Peroxisome biogenesis factor 10.
   
 
 0.655
CKAN_02194800
CLP protease regulatory subunit CLPX1, mitochondrial.
 
 
 0.637
CKAN_02696200
CLP protease regulatory subunit CLPX1, mitochondrial isoform X1.
 
 
 0.637
CKAN_02592500
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.624
CKAN_01445600
Peroxisomal membrane protein PEX14 isoform X1.
   
 0.603
CKAN_01071400
Peroxisomal membrane protein PEX14-like protein isoform X3.
   
 0.603
CKAN_01584200
Transaldolase-like protein.
    
  0.600
CKAN_01430700
Sucrose-phosphatase 2.
  
  
 0.593
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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