STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00494000Dynein light chain. (104 aa)    
Predicted Functional Partners:
CKAN_01963100
Actin.
    
 0.822
CKAN_00708200
Putative actin-97 protein.
    
 0.822
CKAN_01545300
Actin-101-like protein.
    
 0.822
CKAN_02214100
Actin 4.
    
 0.822
CKAN_00954300
Actin 7.
    
 0.822
CKAN_01341200
Actin; Belongs to the actin family.
    
 0.822
CKAN_01341300
Actin.
    
 0.822
CKAN_01855800
Actin-101-like protein.
    
 0.822
CKAN_00805500
Nucleoside diphosphate kinase.
    
   0.755
CKAN_00349000
Calmodulin cam-206; Belongs to the calmodulin family.
   
 0.752
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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