STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00505600Histidine-containing phosphotransfer protein 1 isoform X1. (151 aa)    
Predicted Functional Partners:
CKAN_01595600
Histidine kinase 3-like protein.
   
 0.916
CKAN_00346100
Signal transduction response regulator.
   
 0.907
CKAN_02536600
Signal transduction response regulator.
   
 0.866
CKAN_02536500
Histidine kinase 2 isoform X2.
   
 0.866
CKAN_00374600
Histidine kinase 5 isoform X1.
   
 0.838
CKAN_02050800
Histidine kinase 5 isoform X1.
   
 0.838
CKAN_02621600
Response regulatory domain-containing protein.
   
 0.590
CKAN_02025400
Two-component response regulator ORR24-like protein.
    
 0.572
CKAN_01449500
Two-component response regulator ARR14-like protein.
    
 0.572
CKAN_01069000
Two-component response regulator ORR21-like protein.
    
 0.572
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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