STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00508600Auxin-binding protein T85. (187 aa)    
Predicted Functional Partners:
CKAN_01863600
Heat shock 22K family protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.714
CKAN_01816800
Interactor of constitutive active ROPs 4-like protein.
      
 0.431
CKAN_02601300
CRIB domain-containing protein RIC6-like protein.
      
 0.428
CKAN_00414500
Dedicator of cytokinesis C-terminal; Belongs to the DOCK family.
      
 0.426
CKAN_00029200
Alpha crystallin/Hsp20 domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.426
CKAN_00921600
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.424
CKAN_01601500
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.422
CKAN_00854500
CRIB domain-containing protein RIC4-like protein.
      
 0.418
CKAN_00876400
Protein-tyrosine-phosphatase IBR5.
      
 0.414
CKAN_00345900
Receptor protein kinase TMK1-like protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
 0.403
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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