STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00519600Kelch repeat and BTB domain-containing protein 13. (367 aa)    
Predicted Functional Partners:
CKAN_02704200
E3 ubiquitin-protein ligase PRT1-like protein.
    
 0.908
CKAN_00260700
Protein NBR1.
    
 0.901
CKAN_01845700
Ankyrin-1 isoform X1.
    
 0.740
CKAN_01711700
Protein TONSOKU.
    
 0.724
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.719
CKAN_00806400
RING-box protein 1a.
    
 0.711
CKAN_02523800
RING-box protein 1a-like protein.
    
 0.711
CKAN_00692500
Cullin-3A-like protein isoform X1; Belongs to the cullin family.
    
 0.687
CKAN_02465100
Cullin-1 isoform X1; Belongs to the cullin family.
    
 0.687
CKAN_00510800
Cullin-1-like protein; Belongs to the cullin family.
    
 0.687
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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