STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00530500STAS domain-containing protein. (652 aa)    
Predicted Functional Partners:
CKAN_02194400
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.815
CKAN_02737400
Cytochrome b559 subunit alpha.
    
   0.735
CKAN_02750400
Photosystem II protein I chloroplast.
    
   0.731
CKAN_01235600
Photosystem I subunit O.
   
   0.730
CKAN_01052600
Photosystem I reaction center subunit psaK, chloroplastic.
   
 
 0.723
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.708
CKAN_01062100
Photosystem I reaction center subunit III, chloroplastic.
   
 
 0.704
CKAN_00067900
Photosystem I reaction center subunit VI-2, chloroplastic-like protein isoform X1.
   
 
 0.689
CKAN_00584100
Photosystem I reaction center subunit VI, chloroplastic-like protein.
   
 
 0.689
CKAN_02511500
Ferredoxin-dependent glutamate synthase, chloroplastic.
     
 0.685
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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