STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00536600Ethylene-responsive transcription factor RAP2-7-like protein. (484 aa)    
Predicted Functional Partners:
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
    
 0.644
CKAN_01394600
Septum-promoting GTP-binding protein 1.
    
 0.632
CKAN_01241200
3-phosphoinositide-dependent protein kinase 2-like protein.
     
 0.573
CKAN_01801800
Uncharacterized protein.
     
 0.528
CKAN_02339100
Uncharacterized protein.
     
 0.528
CKAN_02334500
Protein enabled.
    
  0.520
CKAN_01204200
Ras domain-containing protein.
    
 0.502
CKAN_01485900
Rac-like GTP-binding protein 5.
    
 0.502
CKAN_01567100
Rac-like GTP-binding protein RAC2.
    
 0.502
CKAN_00068600
Rac-like GTP-binding protein ARAC7 isoform X2.
    
 0.502
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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