STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00592300Ammonium transporter. (473 aa)    
Predicted Functional Partners:
CKAN_02382000
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.978
CKAN_02295400
Glutamine synthetase.
  
  
 0.565
CKAN_01836300
Putative aminotransferase ACS12.
     
 0.437
CKAN_02158800
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.427
CKAN_01748000
Putative aconitate hydratase, cytoplasmic.
  
 
 0.427
CKAN_00783300
Aconitate hydratase, cytoplasmic.
  
 
 0.427
CKAN_01928600
Phosphatidylserine decarboxylase proenzyme 2 isoform X2.
     
 0.425
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.423
CKAN_02265200
Uncharacterized protein.
   
 
  0.422
CKAN_00714100
Nitrate reductase NADH-like protein.
   
  
 0.404
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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