STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00597200Tetratricopeptide repeat-containing domain-containing protein. (1085 aa)    
Predicted Functional Partners:
CKAN_02408500
GNAT domain-containing protein.
   
 
 0.975
CKAN_02360600
Huntingtin-interacting protein K.
    
 
 0.960
CKAN_01180300
N-alpha-acetyltransferase 50.
   
 
 0.954
CKAN_00593300
N-alpha-acetyltransferase 50-like protein.
   
 
 0.954
CKAN_00970000
GNAT domain-containing protein.
   
 
 0.953
CKAN_00749000
Phagocyte signaling-impaired protein isoform X2.
   
  
 0.855
CKAN_02524900
60S ribosomal protein L27a-2; Belongs to the universal ribosomal protein uL15 family.
    
   0.784
CKAN_00297900
Ribosomal protein L32e.
   
   0.765
CKAN_02679900
Ribosomal_L32e domain-containing protein.
   
   0.765
CKAN_00092800
60S ribosomal protein L31.
    
   0.764
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.