STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00643700Proline iminopeptidase. (415 aa)    
Predicted Functional Partners:
CKAN_01924200
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
    
 0.969
CKAN_00277600
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
    
 0.887
CKAN_01388300
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.877
CKAN_01851600
Delta1-pyrroline-2-carboxylate reductase.
     
 0.857
CKAN_02402300
Receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1.
    
  0.847
CKAN_02291900
Receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1.
    
  0.847
CKAN_01475400
HAD-superfamily hydrolase.
  
 
 0.847
CKAN_01874800
Putative acyl-activating enzyme 19 isoform X1.
    
 0.812
CKAN_02031000
Leucine aminopeptidase 1.
    
 0.798
CKAN_00382800
Leucine aminopeptidase 1-like protein.
    
 0.798
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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