STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00680500Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (728 aa)    
Predicted Functional Partners:
CKAN_02521800
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
CKAN_02533600
Nuclear pore complex protein NUP155.
  
 0.990
CKAN_00307700
Nuclear pore protein.
   
 0.990
CKAN_01672600
Nucleoporin Nup120/160.
  
 0.990
CKAN_00288200
Nuclear pore complex protein NUP54.
   
 0.989
CKAN_00249100
Nuclear pore complex protein NUP58.
   
 0.988
CKAN_02242000
Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
   
 0.987
CKAN_01890000
Nucleoporin Nup88.
   
 0.982
CKAN_02033200
Protein transport protein SEC13 B-like protein; Belongs to the WD repeat SEC13 family.
    
 0.978
CKAN_00734700
Uncharacterized protein.
   
 0.977
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.