Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00584000 | CKAN_00698900 | A0A3S3MCQ2 | A0A443NIX1 | Aspartate aminotransferase. | annotation not available | 0.807 |
CKAN_00584000 | CKAN_00751100 | A0A3S3MCQ2 | A0A3S4NLZ7 | Aspartate aminotransferase. | Arogenate dehydrogenase 1, chloroplastic isoform X1. | 0.911 |
CKAN_00584000 | CKAN_00783500 | A0A3S3MCQ2 | A0A443NL89 | Aspartate aminotransferase. | Ornithine/DAP/Arg decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.800 |
CKAN_00584000 | CKAN_01384100 | A0A3S3MCQ2 | A0A3S3MYR1 | Aspartate aminotransferase. | Protein PHYLLO, chloroplastic isoform X1. | 0.912 |
CKAN_00584000 | CKAN_01585800 | A0A3S3MCQ2 | A0A3S3MNN4 | Aspartate aminotransferase. | Aspartate/glutamate/uridylate kinase. | 0.931 |
CKAN_00584000 | CKAN_01765600 | A0A3S3MCQ2 | A0A3S3QRU5 | Aspartate aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.953 |
CKAN_00584000 | CKAN_01820700 | A0A3S3MCQ2 | A0A3S3NK08 | Aspartate aminotransferase. | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. | 0.535 |
CKAN_00584000 | CKAN_02361600 | A0A3S3MCQ2 | A0A3S3R4J3 | Aspartate aminotransferase. | Ornithine/DAP/Arg decarboxylase. | 0.800 |
CKAN_00584000 | CKAN_02495100 | A0A3S3MCQ2 | A0A3S3R5B7 | Aspartate aminotransferase. | Histidinol-phosphate aminotransferase, chloroplastic isoform X1. | 0.933 |
CKAN_00584000 | CKAN_02561100 | A0A3S3MCQ2 | A0A443PZT1 | Aspartate aminotransferase. | Putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. | 0.535 |
CKAN_00698900 | CKAN_00584000 | A0A443NIX1 | A0A3S3MCQ2 | annotation not available | Aspartate aminotransferase. | 0.807 |
CKAN_00698900 | CKAN_00751100 | A0A443NIX1 | A0A3S4NLZ7 | annotation not available | Arogenate dehydrogenase 1, chloroplastic isoform X1. | 0.843 |
CKAN_00698900 | CKAN_00783500 | A0A443NIX1 | A0A443NL89 | annotation not available | Ornithine/DAP/Arg decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.812 |
CKAN_00698900 | CKAN_01384100 | A0A443NIX1 | A0A3S3MYR1 | annotation not available | Protein PHYLLO, chloroplastic isoform X1. | 0.902 |
CKAN_00698900 | CKAN_01585800 | A0A443NIX1 | A0A3S3MNN4 | annotation not available | Aspartate/glutamate/uridylate kinase. | 0.815 |
CKAN_00698900 | CKAN_01765600 | A0A443NIX1 | A0A3S3QRU5 | annotation not available | 4-hydroxyphenylpyruvate dioxygenase. | 0.819 |
CKAN_00698900 | CKAN_01820700 | A0A443NIX1 | A0A3S3NK08 | annotation not available | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. | 0.919 |
CKAN_00698900 | CKAN_02361600 | A0A443NIX1 | A0A3S3R4J3 | annotation not available | Ornithine/DAP/Arg decarboxylase. | 0.812 |
CKAN_00698900 | CKAN_02495100 | A0A443NIX1 | A0A3S3R5B7 | annotation not available | Histidinol-phosphate aminotransferase, chloroplastic isoform X1. | 0.821 |
CKAN_00698900 | CKAN_02561100 | A0A443NIX1 | A0A443PZT1 | annotation not available | Putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. | 0.919 |
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