STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00740700Anaphase-promoting complex subunit 1. (1832 aa)    
Predicted Functional Partners:
CKAN_01072700
Anaphase-promoting complex subunit 2-like protein; Belongs to the cullin family.
    
 0.999
CKAN_01825700
Anaphase-promoting complex subunit 6.
   
 0.999
CKAN_01637800
Anaphase-promoting complex subunit 8.
   
 0.999
CKAN_00369400
Anaphase-promoting complex subunit 4.
   
 0.999
CKAN_02378100
Anaphase-promoting complex subunit 11.
    
 0.999
CKAN_00500500
Anaphase-promoting complex subunit 7.
   
 0.995
CKAN_02320100
Anaphase-promoting complex subunit 10.
    
 0.995
CKAN_02320200
Anaphase-promoting complex subunit 10.
    
 0.995
CKAN_02632200
Mitotic spindle checkpoint protein MAD2.
    
 0.994
CKAN_01098600
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 0.989
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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