STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00749000Phagocyte signaling-impaired protein isoform X2. (1017 aa)    
Predicted Functional Partners:
CKAN_00622700
GNAT domain-containing protein.
    
 
 0.927
CKAN_00204700
Uncharacterized protein.
    
 
 0.908
CKAN_00088900
Uncharacterized protein.
    
 
 0.908
CKAN_00621100
Uncharacterized protein.
    
 
 0.908
CKAN_01153200
Uncharacterized protein.
    
 
 0.908
CKAN_00597200
Tetratricopeptide repeat-containing domain-containing protein.
   
  
 0.855
CKAN_02664100
Uncharacterized protein.
   
 
 0.851
CKAN_01139200
Myosin-3-like protein isoform X2.
   
 
 0.851
CKAN_00357900
U3 small nucleolar RNA-associated protein 21.
   
    0.750
CKAN_00992600
Zinc finger protein.
   
    0.744
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.