STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00747700SAM50-like protein SPAC17C9.06. (543 aa)    
Predicted Functional Partners:
CKAN_01303500
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
   
 0.992
CKAN_00322600
Mitochondrial import receptor subunit TOM40-1-like protein.
    
 0.983
CKAN_00032200
Mitochondrial import receptor subunit TOM9-2-like protein.
   
 0.966
CKAN_01172700
MICOS complex subunit Mic10.
   
 0.923
CKAN_00609100
MICOS complex subunit Mic10.
   
 0.923
CKAN_02659800
E3 ubiquitin-protein ligase RNF170-like protein.
   
 0.923
CKAN_00643900
Putative zinc metallopeptidase EGY3, chloroplastic.
  
  
 0.859
CKAN_00117000
Putative membrane metalloprotease ARASP2, chloroplastic.
  
  
 0.859
CKAN_00644100
Putative zinc metallopeptidase EGY3, chloroplastic.
  
  
 0.859
CKAN_01166400
Mitochondrial outer membrane protein porin 2-like protein.
   
 0.845
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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