STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00777500Type III polyketide synthase B; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (130 aa)    
Predicted Functional Partners:
CKAN_01874800
Putative acyl-activating enzyme 19 isoform X1.
  
 0.970
CKAN_00368300
4'-phosphopantetheinyl transferase superfamily.
   
 0.919
CKAN_00433200
4'-phosphopantetheinyl transferase superfamily.
   
 0.919
CKAN_01894600
Acetyl-CoA carboxylase 1-like protein.
  
 
 0.895
CKAN_00997500
Acyl transferase.
  
 0.847
CKAN_00997700
Acyl transferase.
  
 0.847
CKAN_00027600
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.823
CKAN_00783000
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.823
CKAN_01107000
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.823
CKAN_01355400
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.823
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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