STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00811700Non-functional NADPH-dependent codeinone reductase 2 isoform X2. (322 aa)    
Predicted Functional Partners:
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
  
 
 0.915
CKAN_00761900
Trans-cinnamate 4-monooxygenase; Belongs to the cytochrome P450 family.
     
 0.799
CKAN_01300900
4-coumarate--CoA ligase-like protein 1.
   
 0.793
CKAN_00795300
4-coumarate--CoA ligase-like protein 7.
   
 0.772
CKAN_02523600
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.758
CKAN_02293400
Glutathione synthetase.
   
 0.739
CKAN_01140400
L-arabinokinase-like protein isoform X1.
     
 0.724
CKAN_00830000
Alpha-L-arabinofuranosidase 1.
   
  0.723
CKAN_00987700
Glucuronokinase 1-like protein.
   
 
 0.719
CKAN_00170800
Hydroxyphenylpyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.701
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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