Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00137500 | CKAN_00850000 | A0A3S3MQQ0 | A0A443NN12 | Translocon-associated protein subunit beta. | Signal peptide peptidase. | 0.433 |
CKAN_00137500 | CKAN_01306700 | A0A3S3MQQ0 | A0A443P0F6 | Translocon-associated protein subunit beta. | SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family. | 0.967 |
CKAN_00137500 | CKAN_02064900 | A0A3S3MQQ0 | A0A443PL40 | Translocon-associated protein subunit beta. | Protein transport protein Sec61 subunit alpha-like protein; Belongs to the SecY/SEC61-alpha family. | 0.967 |
CKAN_00712100 | CKAN_00850000 | A0A3S3MLG1 | A0A443NN12 | Peptidase S54. | Signal peptide peptidase. | 0.422 |
CKAN_00850000 | CKAN_00137500 | A0A443NN12 | A0A3S3MQQ0 | Signal peptide peptidase. | Translocon-associated protein subunit beta. | 0.433 |
CKAN_00850000 | CKAN_00712100 | A0A443NN12 | A0A3S3MLG1 | Signal peptide peptidase. | Peptidase S54. | 0.422 |
CKAN_00850000 | CKAN_01001800 | A0A443NN12 | A0A3S3Q9P7 | Signal peptide peptidase. | Transcription factor bHLH140 isoform X1. | 0.463 |
CKAN_00850000 | CKAN_01002200 | A0A443NN12 | A0A443NS61 | Signal peptide peptidase. | Transcription factor LAX PANICLE. | 0.474 |
CKAN_00850000 | CKAN_01197000 | A0A443NN12 | A0A3S3QE37 | Signal peptide peptidase. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.410 |
CKAN_00850000 | CKAN_01306700 | A0A443NN12 | A0A443P0F6 | Signal peptide peptidase. | SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family. | 0.436 |
CKAN_00850000 | CKAN_02064900 | A0A443NN12 | A0A443PL40 | Signal peptide peptidase. | Protein transport protein Sec61 subunit alpha-like protein; Belongs to the SecY/SEC61-alpha family. | 0.436 |
CKAN_01001800 | CKAN_00850000 | A0A3S3Q9P7 | A0A443NN12 | Transcription factor bHLH140 isoform X1. | Signal peptide peptidase. | 0.463 |
CKAN_01001800 | CKAN_01002200 | A0A3S3Q9P7 | A0A443NS61 | Transcription factor bHLH140 isoform X1. | Transcription factor LAX PANICLE. | 0.640 |
CKAN_01002200 | CKAN_00850000 | A0A443NS61 | A0A443NN12 | Transcription factor LAX PANICLE. | Signal peptide peptidase. | 0.474 |
CKAN_01002200 | CKAN_01001800 | A0A443NS61 | A0A3S3Q9P7 | Transcription factor LAX PANICLE. | Transcription factor bHLH140 isoform X1. | 0.640 |
CKAN_01197000 | CKAN_00850000 | A0A3S3QE37 | A0A443NN12 | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | Signal peptide peptidase. | 0.410 |
CKAN_01306700 | CKAN_00137500 | A0A443P0F6 | A0A3S3MQQ0 | SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family. | Translocon-associated protein subunit beta. | 0.967 |
CKAN_01306700 | CKAN_00850000 | A0A443P0F6 | A0A443NN12 | SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family. | Signal peptide peptidase. | 0.436 |
CKAN_02064900 | CKAN_00137500 | A0A443PL40 | A0A3S3MQQ0 | Protein transport protein Sec61 subunit alpha-like protein; Belongs to the SecY/SEC61-alpha family. | Translocon-associated protein subunit beta. | 0.967 |
CKAN_02064900 | CKAN_00850000 | A0A443PL40 | A0A443NN12 | Protein transport protein Sec61 subunit alpha-like protein; Belongs to the SecY/SEC61-alpha family. | Signal peptide peptidase. | 0.436 |