STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_008983003-oxo-5-alpha-steroid 4-dehydrogenase. (265 aa)    
Predicted Functional Partners:
CKAN_02148200
3-oxo-5-alpha-steroid 4-dehydrogenase.
     
0.900
CKAN_00026300
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.791
CKAN_01256100
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.791
CKAN_02522600
Reticulon-like protein.
     
 0.625
CKAN_02453400
Reticulon-like protein.
     
 0.625
CKAN_02110200
Methionine adenosyltransferase 2 subunit beta.
     
 0.625
CKAN_00012600
Reticulon-like protein.
     
 0.625
CKAN_00682900
Short-chain dehydrogenase/reductase family 42E member 1.
     
 0.625
CKAN_00031800
Very-long-chain 3-oxoacyl-CoA reductase 1-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.580
CKAN_02172200
3-ketodihydrosphingosine reductase.
   
 
 0.580
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.