Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00639000 | CKAN_00675800 | A0A443NH97 | A0A443NI98 | Zinc finger CCCH domain-containing protein 40-like protein. | SKI-interacting protein SKIP. | 0.999 |
CKAN_00639000 | CKAN_00904200 | A0A443NH97 | A0A443NPI3 | Zinc finger CCCH domain-containing protein 40-like protein. | Zinc finger protein. | 0.542 |
CKAN_00639000 | CKAN_02244000 | A0A443NH97 | A0A3S3MZX2 | Zinc finger CCCH domain-containing protein 40-like protein. | Crooked neck-like protein 1. | 0.999 |
CKAN_00675800 | CKAN_00639000 | A0A443NI98 | A0A443NH97 | SKI-interacting protein SKIP. | Zinc finger CCCH domain-containing protein 40-like protein. | 0.999 |
CKAN_00675800 | CKAN_00904200 | A0A443NI98 | A0A443NPI3 | SKI-interacting protein SKIP. | Zinc finger protein. | 0.567 |
CKAN_00675800 | CKAN_02244000 | A0A443NI98 | A0A3S3MZX2 | SKI-interacting protein SKIP. | Crooked neck-like protein 1. | 0.999 |
CKAN_00904200 | CKAN_00639000 | A0A443NPI3 | A0A443NH97 | Zinc finger protein. | Zinc finger CCCH domain-containing protein 40-like protein. | 0.542 |
CKAN_00904200 | CKAN_00675800 | A0A443NPI3 | A0A443NI98 | Zinc finger protein. | SKI-interacting protein SKIP. | 0.567 |
CKAN_00904200 | CKAN_02106100 | A0A443NPI3 | A0A443PM76 | Zinc finger protein. | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | 0.522 |
CKAN_00904200 | CKAN_02244000 | A0A443NPI3 | A0A3S3MZX2 | Zinc finger protein. | Crooked neck-like protein 1. | 0.541 |
CKAN_00904200 | CKAN_02350900 | A0A443NPI3 | A0A443PTW9 | Zinc finger protein. | Pumilio RNA-binding repeat. | 0.401 |
CKAN_02106100 | CKAN_00904200 | A0A443PM76 | A0A443NPI3 | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | Zinc finger protein. | 0.522 |
CKAN_02106100 | CKAN_02244000 | A0A443PM76 | A0A3S3MZX2 | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | Crooked neck-like protein 1. | 0.478 |
CKAN_02106100 | CKAN_02350900 | A0A443PM76 | A0A443PTW9 | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | Pumilio RNA-binding repeat. | 0.439 |
CKAN_02244000 | CKAN_00639000 | A0A3S3MZX2 | A0A443NH97 | Crooked neck-like protein 1. | Zinc finger CCCH domain-containing protein 40-like protein. | 0.999 |
CKAN_02244000 | CKAN_00675800 | A0A3S3MZX2 | A0A443NI98 | Crooked neck-like protein 1. | SKI-interacting protein SKIP. | 0.999 |
CKAN_02244000 | CKAN_00904200 | A0A3S3MZX2 | A0A443NPI3 | Crooked neck-like protein 1. | Zinc finger protein. | 0.541 |
CKAN_02244000 | CKAN_02106100 | A0A3S3MZX2 | A0A443PM76 | Crooked neck-like protein 1. | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | 0.478 |
CKAN_02350900 | CKAN_00904200 | A0A443PTW9 | A0A443NPI3 | Pumilio RNA-binding repeat. | Zinc finger protein. | 0.401 |
CKAN_02350900 | CKAN_02106100 | A0A443PTW9 | A0A443PM76 | Pumilio RNA-binding repeat. | DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family. | 0.439 |