Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00059600 | CKAN_00372500 | A0A3S3MPB4 | A0A3S3NU89 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 0.785 |
CKAN_00059600 | CKAN_00563000 | A0A3S3MPB4 | A0A3S4NH25 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | Ketose-bisphosphate aldolase. | 0.959 |
CKAN_00059600 | CKAN_00581000 | A0A3S3MPB4 | A0A3S3Q158 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | 1-deoxy-D-xylulose 5-phosphate synthase 1. | 0.875 |
CKAN_00059600 | CKAN_00931700 | A0A3S3MPB4 | A0A443NQ72 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | Transaldolase-like protein. | 0.943 |
CKAN_00059600 | CKAN_01316400 | A0A3S3MPB4 | A0A3S3N2R6 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 0.785 |
CKAN_00059600 | CKAN_02290600 | A0A3S3MPB4 | A0A3S3N759 | 1-deoxy-D-xylulose 5-phosphate synthase 3. | Putative 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic. | 0.877 |
CKAN_00372500 | CKAN_00059600 | A0A3S3NU89 | A0A3S3MPB4 | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 1-deoxy-D-xylulose 5-phosphate synthase 3. | 0.785 |
CKAN_00372500 | CKAN_00563000 | A0A3S3NU89 | A0A3S4NH25 | 1-deoxy-D-xylulose 5-phosphate synthase 2. | Ketose-bisphosphate aldolase. | 0.959 |
CKAN_00372500 | CKAN_00581000 | A0A3S3NU89 | A0A3S3Q158 | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 1-deoxy-D-xylulose 5-phosphate synthase 1. | 0.666 |
CKAN_00372500 | CKAN_00931700 | A0A3S3NU89 | A0A443NQ72 | 1-deoxy-D-xylulose 5-phosphate synthase 2. | Transaldolase-like protein. | 0.943 |
CKAN_00372500 | CKAN_02290600 | A0A3S3NU89 | A0A3S3N759 | 1-deoxy-D-xylulose 5-phosphate synthase 2. | Putative 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic. | 0.783 |
CKAN_00563000 | CKAN_00059600 | A0A3S4NH25 | A0A3S3MPB4 | Ketose-bisphosphate aldolase. | 1-deoxy-D-xylulose 5-phosphate synthase 3. | 0.959 |
CKAN_00563000 | CKAN_00372500 | A0A3S4NH25 | A0A3S3NU89 | Ketose-bisphosphate aldolase. | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 0.959 |
CKAN_00563000 | CKAN_00581000 | A0A3S4NH25 | A0A3S3Q158 | Ketose-bisphosphate aldolase. | 1-deoxy-D-xylulose 5-phosphate synthase 1. | 0.959 |
CKAN_00563000 | CKAN_00931700 | A0A3S4NH25 | A0A443NQ72 | Ketose-bisphosphate aldolase. | Transaldolase-like protein. | 0.979 |
CKAN_00563000 | CKAN_00933400 | A0A3S4NH25 | A0A3S4NRM5 | Ketose-bisphosphate aldolase. | Transketolase, chloroplastic. | 0.959 |
CKAN_00563000 | CKAN_01316400 | A0A3S4NH25 | A0A3S3N2R6 | Ketose-bisphosphate aldolase. | 1-deoxy-D-xylulose 5-phosphate synthase 2. | 0.959 |
CKAN_00563000 | CKAN_02079300 | A0A3S4NH25 | A0A443PLH4 | Ketose-bisphosphate aldolase. | Transketolase, chloroplastic-like protein. | 0.959 |
CKAN_00563000 | CKAN_02290600 | A0A3S4NH25 | A0A3S3N759 | Ketose-bisphosphate aldolase. | Putative 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic. | 0.959 |
CKAN_00563000 | CKAN_02290900 | A0A3S4NH25 | A0A3S3P591 | Ketose-bisphosphate aldolase. | Lipase isoform X2. | 0.959 |
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