STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00938000Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family. (391 aa)    
Predicted Functional Partners:
CKAN_00699700
Metallophosphoesterase 1-like protein isoform X1.
    
 
 0.650
CKAN_02515300
Metallophosphoesterase 1-like protein.
    
 
 0.650
CKAN_01214700
GPI inositol-deacylase isoform X2.
    
 
 0.535
CKAN_00959600
Putative GPI-anchor transamidase isoform X1.
    
 
 0.497
CKAN_01340600
Small GTPase superfamily.
      
 0.446
CKAN_02288200
Alkaline ceramidase 3-like protein.
      
 0.434
CKAN_01602600
GPI transamidase component PIG-T.
      
 0.431
CKAN_01464900
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
      
 0.428
CKAN_02219200
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
      
 0.418
CKAN_02396200
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
      
 0.404
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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