Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00747700 | CKAN_00985700 | A0A443NK99 | A0A443NRN1 | SAM50-like protein SPAC17C9.06. | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | 0.424 |
CKAN_00747700 | CKAN_01903100 | A0A443NK99 | A0A443PGQ3 | SAM50-like protein SPAC17C9.06. | RNA-binding protein CP33, chloroplastic. | 0.424 |
CKAN_00985700 | CKAN_00747700 | A0A443NRN1 | A0A443NK99 | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | SAM50-like protein SPAC17C9.06. | 0.424 |
CKAN_00985700 | CKAN_01903100 | A0A443NRN1 | A0A443PGQ3 | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | RNA-binding protein CP33, chloroplastic. | 0.424 |
CKAN_00985700 | CKAN_02359500 | A0A443NRN1 | A0A443PU66 | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | Pentatricopeptide repeat-containing protein, chloroplastic-like protein. | 0.430 |
CKAN_01903100 | CKAN_00747700 | A0A443PGQ3 | A0A443NK99 | RNA-binding protein CP33, chloroplastic. | SAM50-like protein SPAC17C9.06. | 0.424 |
CKAN_01903100 | CKAN_00985700 | A0A443PGQ3 | A0A443NRN1 | RNA-binding protein CP33, chloroplastic. | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | 0.424 |
CKAN_02359500 | CKAN_00985700 | A0A443PU66 | A0A443NRN1 | Pentatricopeptide repeat-containing protein, chloroplastic-like protein. | Multiple organellar RNA editing factor 2, chloroplastic-like protein. | 0.430 |