STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01039100Serine/arginine-rich splicing factor RS2Z32-like protein isoform X2. (329 aa)    
Predicted Functional Partners:
CKAN_02221700
Serine/arginine-rich splicing factor SC35-like protein.
   
0.963
CKAN_02395600
RNA recognition motif domain-containing protein.
   
0.943
CKAN_01542300
Serine/arginine-rich splicing factor SR34A isoform X1.
   
0.942
CKAN_02271300
Serine/arginine-rich splicing factor SC35.
   
 0.942
CKAN_00307800
RNA-binding protein 8A.
   
 0.936
CKAN_00518700
Serine/arginine-rich SC35-like protein splicing factor SCL30.
   
 0.931
CKAN_02294700
Type I inositol polyphosphate 5-phosphatase 2 isoform X1.
   
 0.930
CKAN_00421100
U1 small nuclear ribonucleoprotein-like protein.
   
 0.924
CKAN_00422400
U1 small nuclear ribonucleoprotein-like protein.
   
0.924
CKAN_01570600
Protein mago nashi.
   
 0.908
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (24%) [HD]