STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01040400C2 calcium-dependent membrane targeting. (537 aa)    
Predicted Functional Partners:
CKAN_01201900
Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily.
   
 
  0.787
CKAN_02321200
Monodehydroascorbate reductase 4, peroxisomal.
   
 
  0.783
CKAN_00658300
L-ascorbate oxidase-like protein; Belongs to the multicopper oxidase family.
    
  0.778
CKAN_02727100
L-ascorbate oxidase isoform X1.
    
  0.768
CKAN_01676800
Monodehydroascorbate reductase, chloroplastic/mitochondrial.
   
 
  0.668
CKAN_00222400
Heme peroxidase.
   
 
 0.641
CKAN_02016600
Choline/ethanolaminephosphotransferase 1 isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.637
CKAN_00270600
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
   
 
 0.636
CKAN_02591700
Acyl-lipid 9-3-desaturase-like protein.
   
 
  0.624
CKAN_01218600
Monodehydroascorbate reductase.
   
 
  0.617
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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