STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01050000Fanconi anemia group D2 protein. (1510 aa)    
Predicted Functional Partners:
CKAN_00494100
Fanconi anemia group I protein.
  
 0.997
CKAN_01122500
E3 ubiquitin-protein ligase FANCL isoform X1.
  
 
 0.996
CKAN_00270000
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.982
CKAN_02467800
NPL4-like protein 2.
    
 0.978
CKAN_00996200
Protein BREAST CANCER SUSCEPTIBILITY 2 B-like protein isoform X1.
   
 0.974
CKAN_02660600
Protein BREAST CANCER SUSCEPTIBILITY 2 B-like protein isoform X1.
   
 0.974
CKAN_01419300
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.933
CKAN_01195500
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.933
CKAN_00943700
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.933
CKAN_00990500
60S ribosomal protein L10a.
    
 0.933
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.