STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01064500Protein decapping 5. (205 aa)    
Predicted Functional Partners:
CKAN_02106100
DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family.
   
 
 0.945
CKAN_01273200
mRNA-decapping enzyme subunit 2.
    
 
 0.874
CKAN_01101800
mRNA-decapping enzyme-like protein.
    
 
 0.826
CKAN_01407700
Uncharacterized protein.
    
 
 0.826
CKAN_02169100
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 
 0.794
CKAN_01904700
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 
 0.794
CKAN_00748600
Dehydration-responsive element-binding protein 2C-like protein.
   
 
 0.780
CKAN_01021000
Helicase protein MOM1-like protein isoform X1.
   
 
 0.780
CKAN_00456000
Protein CHROMATIN REMODELING 5.
   
 
 0.780
CKAN_02604200
Helicase protein MOM1-like protein isoform X2.
   
 
 0.780
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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