Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00033700 | CKAN_01098100 | A0A443N0S4 | A0A443NUT9 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 5-formyltetrahydrofolate cyclo-ligase-like protein. | 0.935 |
CKAN_00033700 | CKAN_01455400 | A0A443N0S4 | A0A3S3N000 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Urease accessory protein UreD. | 0.883 |
CKAN_00033700 | CKAN_01849200 | A0A443N0S4 | A0A3S3MTE8 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Protein SLOW WALKER 1. | 0.424 |
CKAN_00033700 | CKAN_01886100 | A0A443N0S4 | A0A443PG98 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Formyltetrahydrofolate deformylase 1, mitochondrial isoform X1. | 0.932 |
CKAN_00033700 | CKAN_02130800 | A0A443N0S4 | A0A3S4PLR2 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Phosphoribosylglycinamide formyltransferase, chloroplastic. | 0.928 |
CKAN_00033700 | CKAN_02143700 | A0A443N0S4 | A0A3S4PM01 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Tetrahydrofolate dehydrogenase/cyclohydrolase. | 0.882 |
CKAN_00033700 | CKAN_02325400 | A0A443N0S4 | A0A3S3NKK4 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Bifunctional purine biosynthesis protein PurH-like protein isoform X2. | 0.897 |
CKAN_00033700 | CKAN_02370200 | A0A443N0S4 | A0A3S3NLA9 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | WD40 repeat. | 0.410 |
CKAN_00033700 | CKAN_02416900 | A0A443N0S4 | A0A443PVQ2 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Formyl transferase. | 0.935 |
CKAN_00033700 | CKAN_02530300 | A0A443N0S4 | A0A3S3R867 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Formate--tetrahydrofolate ligase. | 0.951 |
CKAN_01098100 | CKAN_00033700 | A0A443NUT9 | A0A443N0S4 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.935 |
CKAN_01098100 | CKAN_01455400 | A0A443NUT9 | A0A3S3N000 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Urease accessory protein UreD. | 0.883 |
CKAN_01098100 | CKAN_01849200 | A0A443NUT9 | A0A3S3MTE8 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Protein SLOW WALKER 1. | 0.888 |
CKAN_01098100 | CKAN_01886100 | A0A443NUT9 | A0A443PG98 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Formyltetrahydrofolate deformylase 1, mitochondrial isoform X1. | 0.926 |
CKAN_01098100 | CKAN_02130800 | A0A443NUT9 | A0A3S4PLR2 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Phosphoribosylglycinamide formyltransferase, chloroplastic. | 0.912 |
CKAN_01098100 | CKAN_02143700 | A0A443NUT9 | A0A3S4PM01 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Tetrahydrofolate dehydrogenase/cyclohydrolase. | 0.885 |
CKAN_01098100 | CKAN_02325400 | A0A443NUT9 | A0A3S3NKK4 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Bifunctional purine biosynthesis protein PurH-like protein isoform X2. | 0.883 |
CKAN_01098100 | CKAN_02370200 | A0A443NUT9 | A0A3S3NLA9 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | WD40 repeat. | 0.883 |
CKAN_01098100 | CKAN_02416900 | A0A443NUT9 | A0A443PVQ2 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Formyl transferase. | 0.933 |
CKAN_01098100 | CKAN_02530300 | A0A443NUT9 | A0A3S3R867 | 5-formyltetrahydrofolate cyclo-ligase-like protein. | Formate--tetrahydrofolate ligase. | 0.941 |
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