STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01104600Gibberellin 2-beta-dioxygenase 8-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)    
Predicted Functional Partners:
CKAN_00226700
Gibberellin 3-beta-dioxygenase 1-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.871
CKAN_02728000
Gibberellin 3-beta-dioxygenase 1-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.869
CKAN_00151300
Gibberellin 3-beta-dioxygenase 1-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.866
CKAN_01006200
Gibberellin 20 oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.862
CKAN_00945700
Gibberellin 20 oxidase 1-D-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.861
CKAN_01635800
Gibberellin 20 oxidase 1-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.856
CKAN_01874800
Putative acyl-activating enzyme 19 isoform X1.
     
 0.703
CKAN_01855700
Autophagy-related protein 13.
   
 0.558
CKAN_01577600
Autophagy-related protein 13b.
   
 0.558
CKAN_00593800
DELLA protein GAI-like protein; Belongs to the GRAS family.
      
 0.503
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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