Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00156800 | CKAN_00441400 | A0A3S3NQN2 | A0A3S3MW82 | Nudix hydrolase 19, chloroplastic. | AUGMIN subunit 5-like protein. | 0.667 |
CKAN_00156800 | CKAN_00441700 | A0A3S3NQN2 | A0A443NBZ5 | Nudix hydrolase 19, chloroplastic. | AUGMIN subunit 5. | 0.667 |
CKAN_00156800 | CKAN_00909200 | A0A3S3NQN2 | A0A443NPK3 | Nudix hydrolase 19, chloroplastic. | HAD hydrolase. | 0.938 |
CKAN_00156800 | CKAN_01106500 | A0A3S3NQN2 | A0A443NV10 | Nudix hydrolase 19, chloroplastic. | Purple acid phosphatase. | 0.702 |
CKAN_00156800 | CKAN_02198900 | A0A3S3NQN2 | A0A3S3NR87 | Nudix hydrolase 19, chloroplastic. | NAD kinase 2, chloroplastic. | 0.913 |
CKAN_00156800 | CKAN_02304500 | A0A3S3NQN2 | A0A3S3P5F9 | Nudix hydrolase 19, chloroplastic. | Putative NAD kinase 1. | 0.878 |
CKAN_00156800 | CKAN_02572300 | A0A3S3NQN2 | A0A3S3R739 | Nudix hydrolase 19, chloroplastic. | Bifunctional riboflavin kinase/FMN phosphatase-like protein. | 0.985 |
CKAN_00441400 | CKAN_00156800 | A0A3S3MW82 | A0A3S3NQN2 | AUGMIN subunit 5-like protein. | Nudix hydrolase 19, chloroplastic. | 0.667 |
CKAN_00441400 | CKAN_00591600 | A0A3S3MW82 | A0A3S3MCU8 | AUGMIN subunit 5-like protein. | NUDIX hydrolase domain-containing protein. | 0.667 |
CKAN_00441400 | CKAN_00708400 | A0A3S3MW82 | A0A3S3Q4E7 | AUGMIN subunit 5-like protein. | Nudix hydrolase 23, chloroplastic. | 0.667 |
CKAN_00441400 | CKAN_01106500 | A0A3S3MW82 | A0A443NV10 | AUGMIN subunit 5-like protein. | Purple acid phosphatase. | 0.678 |
CKAN_00441700 | CKAN_00156800 | A0A443NBZ5 | A0A3S3NQN2 | AUGMIN subunit 5. | Nudix hydrolase 19, chloroplastic. | 0.667 |
CKAN_00441700 | CKAN_00591600 | A0A443NBZ5 | A0A3S3MCU8 | AUGMIN subunit 5. | NUDIX hydrolase domain-containing protein. | 0.667 |
CKAN_00441700 | CKAN_00708400 | A0A443NBZ5 | A0A3S3Q4E7 | AUGMIN subunit 5. | Nudix hydrolase 23, chloroplastic. | 0.667 |
CKAN_00441700 | CKAN_01106500 | A0A443NBZ5 | A0A443NV10 | AUGMIN subunit 5. | Purple acid phosphatase. | 0.678 |
CKAN_00486700 | CKAN_00909200 | A0A443ND40 | A0A443NPK3 | NHL repeat-containing protein 2 isoform X1. | HAD hydrolase. | 0.488 |
CKAN_00486700 | CKAN_01106500 | A0A443ND40 | A0A443NV10 | NHL repeat-containing protein 2 isoform X1. | Purple acid phosphatase. | 0.836 |
CKAN_00486700 | CKAN_02572300 | A0A443ND40 | A0A3S3R739 | NHL repeat-containing protein 2 isoform X1. | Bifunctional riboflavin kinase/FMN phosphatase-like protein. | 0.902 |
CKAN_00591600 | CKAN_00441400 | A0A3S3MCU8 | A0A3S3MW82 | NUDIX hydrolase domain-containing protein. | AUGMIN subunit 5-like protein. | 0.667 |
CKAN_00591600 | CKAN_00441700 | A0A3S3MCU8 | A0A443NBZ5 | NUDIX hydrolase domain-containing protein. | AUGMIN subunit 5. | 0.667 |
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