STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01143100NADP-dependent malic enzyme isoform X1. (573 aa)    
Predicted Functional Partners:
CKAN_02391500
Fumarate lyase.
  
 
 0.912
CKAN_02309700
Lactate/malate dehydrogenase.
  
 0.875
CKAN_01256900
Malate synthase; Belongs to the malate synthase family.
  
 
 0.864
CKAN_02588500
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.861
CKAN_00923700
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.858
CKAN_01787700
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.857
CKAN_00328000
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.855
CKAN_00135100
Alanine aminotransferase 2.
  
 0.852
CKAN_02335500
Glutamate--glyoxylate aminotransferase 2.
  
 0.852
CKAN_00949400
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.849
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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