STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01177000ARF guanine-nucleotide exchange factor GNL2. (1377 aa)    
Predicted Functional Partners:
CKAN_00057500
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.960
CKAN_00098300
Brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1.
  
 
0.903
CKAN_00972800
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.891
CKAN_01575200
ADP-ribosylation factor 1-like protein 2 isoform X2; Belongs to the small GTPase superfamily. Arf family.
    
 0.891
CKAN_00963700
Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
CKAN_01451100
Putative small GTPase superfamily, Rab type; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
CKAN_02452300
ADP-ribosylation factor 2-like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
CKAN_01691900
ADP ribosylation factor-like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
CKAN_00323100
GTP-binding protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
CKAN_00609300
ADP-ribosylation factor 1 isoform X2; Belongs to the small GTPase superfamily. Arf family.
    
 0.882
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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