STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01215300Nuclear inhibitor of protein phosphatase 1-like protein. (424 aa)    
Predicted Functional Partners:
CKAN_00848200
Uridine 5'-monophosphate synthase.
   
 
  0.864
CKAN_00020300
Thymidylate kinase isoform X1.
     
 0.800
CKAN_02630900
Thymidylate kinase isoform X1.
     
 0.800
CKAN_00020600
Thymidylate kinase.
     
 0.800
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
     
 0.792
CKAN_01155600
Guanylate kinase 2-like protein.
     
 0.792
CKAN_02448800
tRNA pseudouridine synthase.
   
 
  0.783
CKAN_02188000
tRNA pseudouridine synthase.
   
 
  0.783
CKAN_00884300
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.772
CKAN_01107500
Serine/threonine-protein phosphatase BSL2 like.
   
 
 0.772
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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