STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01225200C2H2-type domain-containing protein. (387 aa)    
Predicted Functional Partners:
CKAN_02501500
SET domain-containing protein.
    
 0.795
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.775
CKAN_02290700
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 8-B-like protein.
    
  0.634
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
    
 0.623
CKAN_00504600
Serine/threonine-protein phosphatase.
    
 0.616
CKAN_02467900
Serine/threonine-protein phosphatase.
    
 0.616
CKAN_02123300
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.592
CKAN_01391800
tRNA wybutosine-synthesizing protein 2/3/4 isoform X2.
    
 0.585
CKAN_01880800
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.580
CKAN_01563900
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.580
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.